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Article Type: Research Paper
Date of acceptance: August 2024
Date of publication: August 2024
DoI: 10.5772/dmht.20240001
copyright: ©2024 The Author(s), Licensee IntechOpen, License: CC BY 4.0
Cell migration is observed in various cases such as embryonic and lesion developments. The migration directly influences the phenomena around the migration path. Bright field microscopy, generally used for cell observation, is effective in tracking cell movement, but the detection of the cell outline via image processing methods partially fails. In this study, a simple method, utilizing the intensity fluctuation of the image caused by the passage of a cell as a parameter for evaluation of the cell movement, has been proposed to visualize the region where the cell passed and quantitatively evaluate its frequency by the fluctuation pattern. The map that depicts the activity of cell movement is created, and the geometrical characteristics of each region and fluctuation degree are quantitatively shown. Because detection of the cell outline is not necessary, this method is applicable to collective cells as well as single cells. When this method was applied to the images of hemocytes in
collective cell
single cell
cell motility
bright field microscopy
visualization
quantitative parameter
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Image processing methods for detecting cellular regions in a microgram, such as bright field and fluorescent microscopy images, are essential for cell investigation. Therefore, various methods for segmentation and boundary detection have been proposed [1–3]. Recently, segmentation challenges have been carried out [4]. Deep learning has been helpful for developing this method; its limited application and large training datasets would be a constraint [1]. In the meantime, a segmentation method based on deep learning with pretrained models, Cellpose, has been developed [5, 6]. Adequate preparation for pretrained models leads to continual improvement as well as user-friendly operations. The images of cells in major cell lines and general observation methods or assays are applicable, but those of novel cell types and evaluation methods would be hardly analyzed. While fluorescent labeling, visualizing specific substances, is useful to observe the cellular phenomena properly, the labeling shows disadvantages such as phototoxicity [2, 7]. Bright field microscopy does not cause such damages so that it is widely used from the ordinary observation processes in cell collection and culture to the evaluation of cell migration. Cell migration in the wound healing process, observed in non-labeling and bright field microscopy, has been evaluated by the detection of cellular regions [3, 8–10]: The boundary between cellular and empty regions, which corresponds to the wound outline, has been detected by threshold setting based on the fast discrete curvelet transform [8] and the standard deviation of the intensity in each divided region [9], and a support vector machine based on intensity characteristics [10]. Although the size, shape, and position of the cellular region are detected by these methods [8–10], the behavior of each cell is not observed. Furthermore, CellTraxx [11], based on ImageJ macro, has successfully detected each cell of the major cell lines in phase-contrast microscopy images. While the accuracy of the segmentation, which directly influences the analyses in cell morphology, should be accomplished in the first place, the image characteristics, such as a pattern of the intensity distribution, are influenced by cell conditions so that the analyses could be useful for the investigation of cells.
Cell migration is observed in various phenomena such as embryonic and lesion development [12]. The direction of migration is controlled by chemotaxis, haptotaxis, and durotaxis [13, 14]. Besides, computational models related to the extracellular matrix [15] and competition between chemotaxis and durotaxis [16] have been proposed. Collective cell migration is also observed in various phenomena as cell migration is. In addition to the taxis and mechanical environment, the hierarchy and interaction between the cells should be considered [17–26]. Considering that single and collective cell migration occurs in various places and cell types, cell types related to migration will be found more. A general method to evaluate non-labeling, bright field microscopy images of single and collective cell migration would promote the finding.
Considering open circulatory systems, blood cells migrate in the blood vessel and tissue.
Cellulose
In this study, an image processing method to evaluate single and collective cell migration in bright field microscopy images has been developed. When a cell migrates from one place to another, the intensity along the path fluctuates between the background and the intracellular region. In this method, the fluctuation is used as a parameter to evaluate cell migration. The fluctuation in intensity is generally related to the migration so that this method is not limited to a specific cell line. Furthermore, a foreign body, one of the artifacts, can be removed because of slight fluctuation. Training and parameter modulations are not necessary; just the images that show cell or collective migration are needed. The method is directly influenced by inhomogeneity in intensity so that the result shows a general tendency in each migration, such as the direction and space size in migration rather than a velocity or acceleration map. The method was applied to the hemocytes of
The images of bright field microscopy are used. When a cell passes through the region, the intensity of each pixel in the region fluctuates between the cell and background. That is, the region related to cell migrations shows fluctuation in intensity. The more frequently the cell passes through the pixel, the larger the increase in unbiased variance at the pixel. In the meantime, the fluctuation in intensity at the static cells and the background is low. The average and unbiased variance of the intensity in each pixel is calculated through a time series in order to categorize the regions of the static cell, migrating cell, and the background. The pixel whose unbiased variance is small corresponds to a static cell or the background. In order to identify the static cell and background, the average in each pixel is calculated. The pixel that the cell continuously passes through shows a small fluctuation. In such a case, a region of high unbiased variance area appears with a void. However, the static and this “void” are easily identified because the void is surrounded by a large region of high unbiased variance. Such a large region has not been found around the static cell even when the cell vibrates. In the following description, the region that the cells pass through and shows high unbiased variance is called the “dynamic region” and that for the static cell and the “void” on the migration track is the “static region”.
Just after the extraction, the hemocyte was spindle-shaped and actively moving. However, on the second day, part of the cells became rounded, especially those at the second passage, and moved only slightly. Because this method is developed for single and collective cell migration, these rounded cells were removed from the data analysis (5). However, the rounded cells at the second passage were difficult to remove from the analysis; so the images of these two samples were not used in the data analysis.
All the image analyses were implemented in programming language C while the free software for image processing and analysis (ImageJ, 1.53k, https://imagej.net/ij/index.html) was used to extract the raw data from each image and display its result.
Each process of this method is as described in the following:
Prepare bright field microscopy images:
The range of intensity decided by the image type is checked (
Enhance the contrast in each image:
Gray scale transformation: The maximum and minimum intensities (
Calculate the average and unbiased variance at each pixel:
If the region of the cell is darker than the background, the inverted average is used for detecting the static region, instead of the average.
Average (
Inverted average
Unbiased variance (
Identify the static and dynamic regions:
Binarization: The threshold is decided by the method previously proposed [73].
Region selection: The region including the third quartile in intensity is selected.
After the aforementioned processes, when the area of the dynamic region is smaller than that of the cell, or apparently stable, the region is not evaluated.
Analyze the unbiased variance at each pixel in the dynamic regions:
The parameters for the shape and intensity in each region are evaluated as follows.
Shape: the area (A) and lengths from the centroid (the average (
Intensity: the average (Ave), standard deviation (SD), and length-weighted averages (,
Enhance the contrast in the images for the average and unbiased variance:
Gray scale transformation: The intensity in the static region and dynamic region, whose intensity is more than 0, is linearly transformed as the smallest and largest intensities in these regions are changed to
Visualize the static and dynamic regions:
Individual display (static and dynamic regions are displayed separately): pseudocolor
Complex display (static and dynamic regions appear in the same image): color (red, static region; green, dynamic region).
In order to check the abilities of the method, it was applied to bright field microscopy images of
The linear approximation between the two parameters was carried out by the least squares method. The correlation coefficient in each line was statistically evaluated by the F-test. The significant level was 0.05. The statistical analyses were carried out by spreadsheet software (Excel, Office 2021, Microsoft).
Image processing was carried out successfully for all the images. The resultant images were obtained from all the sample images; the images for the subculture showed many rounded cells beside spindle-shaped cells. The rounded cell moved only slightly while the spindle-shaped cell moved actively. Figures 2 and 3 show part of the images, which is mainly composed of collective and individual behaviors, respectively. The numbers of dynamic regions were 12 and 27, respectively. Comparing the original image and the modified image whose contrasts were enhanced by process (2) in Section 2.1, the boundary between the cell and background became clear for both of the single and collective cells. Figures 4 and 5 show the images for the static region (a), dynamic region (b), and merger of these two regions (c) corresponding to Figures 2 and 3, respectively. In order to compare these results with the original images, (d) images are shown in Figures 4 and 5. The static and dynamic regions, whose intensity was shown by pseudocolor, are helpful to examine which region the cell actively passed through or stayed. Also, the image merging the static and dynamic regions is available to check the interaction between these regions. In all the images, the visualization for the static and dynamic regions has been successfully carried out. However, the region where the cell continuously passes through shows little change in intensity so that the unbiased variance is close to zero and the average is almost the same as that of the static cell. That is, such a region shows no difference from that of a static cell. When the static cell shows vibration, the unbiased variance in its surroundings becomes high. The difference between the static cell with vibration and the migrating cell is the size of the region with high unbiased variance surrounding the lower one. The region of the static cell is smaller than that of the migrating cell. As Figures 4(c) and 5(c) show, the difference is easily recognized. The area ratio between the neighboring regions with higher and lower unbiased variances would be useful to decide whether the region corresponds to the migrating cell.
Comparing the static and dynamic regions, the images of the average and unbiased variance modulated in the same range, from 10 to 255, and the difference between these parameters are shown in Figure 6. Figures 6(a) and 6(b) are the same as Figures 4(c) and 5(c), respectively. Figure 6(c) is the result of the sample, which had many stable cells. The boxes in the images, from
This method does not show the velocity and acceleration for each migration, but the results about the relative level of migration in the same image sequence. In order to evaluate the migration pattern in the image totally, the variance in the same image sequence was evaluated. Figures 7 and 8 show the results of collective cell in Figure 2. Figure 7 shows the relationship between the parameters related to shape and the unbiased variance of intensity. On the assumption that the region is an ellipse whose major and minor axes are
As Figure 7(a) shows, the area in each region was estimated well by the length from the centroid. Also, the average and standard deviation of the length from the centroid was well correlated in Figure 7(b). These results indicate that the region which the cell passed through could be approximated as an ellipse so that the direction of migration could approximate to that of the major axis. Considering that the size of the collective cell was varied and part of the regions had a void, these results also show that shape approximation by an ellipse would be robust in the evaluation of the migration pattern. In the meantime, the average and standard deviation of the variance, which correspond to the frequency of passage and its range, were poorly correlated with each other (Figure 7(c)) and not influenced by the area size related to the region of migration (Figure 7(d)). These parameters, which show the pattern of passage, would not be influenced by each other, but individually determined. That is, even if the cell travels in the broader region, the frequency of passing through each pixel and its range would not be influenced. While these two parameters are related to the velocity of the migration, they are directly influenced by the intensity distribution pattern of the cellular region. Hence, the average and standard deviation would be associated with the velocity, but partially. In order to convert these parameters to velocity, how the distribution pattern of the intensity in the cellular region would influence the parameters should be investigated. Considering that the larger area size of migration is composed of the larger number of cells and the sample of this result is mainly composed of collective cells, the result would indicate interactions between the cells, whose patterns would not show similarity in collective cells with different sizes. Also, lack of similarity would influence the average and standard deviation of the variance.
In Figure 8, the magnitude of the vector
Figures 9 and 10 show the results of cell behaviors in Figure 3. Figures 9(a) and 9(b) show that each area could be approximated as an ellipse. This result agrees with that of Figures 7(a) and 7(b). Considering that Figure 9 is the result for the sample, which had more single cells than that shown by Figure 7, the approximation would be reasonable for both of the categories. Also, Figure 9(d) shows that the average and standard deviation of the variance were poorly correlated with the area as Figure 7(d) shows. The result would be influenced by the mixture of single and collective cells. However, the average and standard deviation of the variance in Figure 9(c) were well correlated with each other while those in Figure 7(c) did not. That is, as the velocity of the migration is increased, the range of velocity is increased. The result shows that the modulation of velocity in single cells would be different from that in collective cells. In the meantime, Figure 10 shows that all the results related to
The data analysis was carried out for all the sample images except two, containing a lot of rounded hemocytes. Although the number of samples was small to describe the representative characteristics of the hemocytes, the analysis described the characteristics in migration quantitatively in each cell sample. The proposed method provided the results, which quantitatively show both the similar and different characteristics in behaviors of single and collective cells.
In this study, a method to evaluate and visualize single and collective cell migration by intensity fluctuation in bright field microscopy images was developed. To check whether the method is useful to evaluate migration, images of the hemocytes of
The results of
The component related to cell movement has been frequently observed. For example, in fluorescent microscopy, the actin filament (F-actin), one of the most important proteins in cell migration, is often observed. The changes in the distribution of F-actin during migration can be detected by the behaviors of the labeled cell. Furthermore, the shape of nuclei can be determined by phase-contrast microscopy. The combination of these factors and behaviors shown by the proposed cells makes it possible to estimate the mechanical factors related to each migration. A computational model based on these mechanical factors would be useful to predict the behaviors of cells, such as the behavior
In this study, a method to evaluate single and collective cell migration in bright field microscopy images was developed. The qualitative and quantitative evaluations for the migration of hemocytes in
The author declares no conflict of interest.
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Article Type: Research Paper
Date of acceptance: August 2024
Date of publication: August 2024
DOI: 10.5772/dmht.20240001
Copyright: The Author(s), Licensee IntechOpen, License: CC BY 4.0
© The Author(s) 2024. Licensee IntechOpen. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
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